Protein Information

Protein ZmHAG9
ZmHAG9 is a protein in the GNAT family.
Information
Coreg Name:	ZmHAG9
Species:	Maize
Coreg Family:	GNAT
Gene Name(Synonym):	HAGTF9
Uniprot ID:	A0A1D6PDQ1
Subgenome:	1

ZmHAG9 is a protein in the GNAT family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
	PF00583	PF13302
Zm00001eb060530_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Gene ID	Type	Sequence	FIMO	Position
Zm00001d034419	DAPseq	sequence	fimo	position
Zm00001d034419	DAPseq	sequence	fimo	position
Zm00001d034419	ChIPseq	sequence	fimo	position
Zm00001d034419	PChIPseq	sequence	fimo	position

Interactions where ZmHAG9 is the regulator

There are no protein-dna interactions that fit this criteria.

Interactions where ZmHAG9 is the target
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There are 182 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb060530_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MEQEAPARPGSVPAVTLRRFELGDVDAMLEWASDPEVTAFMAWDACTSRDALLAFLRDAVLPHPWFRAVCLGGGGHCRPV
GAVSVTPTDDACRAELRVVLARAHRGKGVATAAARRAVSAAFGDLPGVERVEALVDVDHNAAARRVLEKAGFQREAVLRS
YRVVKGRLRDVAVYSFISTDPVVE

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF13302
PF00583
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Nucleotide Sequence
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TGGCTGACAGCGTCAAAGCAGGGAC...

GRMZM2G478798_T01 from maize genome v3

Related TFome: pUT6654

Amino Acid Sequence
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MEQEAPARPGSVPAVTLRRFELGDVDAMLEWASDPEVTAFMAWDACTSRDALLAFLRDAVLPHPWFRAVCLGGGGHCRPV
GAVSVTPTDDACRAELRVVLARAHRGKGVATAAARRAVSAAFGDLPGVERVEALVDVDHNAAARRVLEKAGFQREAVLRS
YRVVKGRLRDVAVYSFISTDPVVE

Nucleotide Sequence
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AAGCAAAAGAAAAGGCAAAAGCAAC...

Zm00001d034419_T001 from maize genome v4

Amino Acid Sequence
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MEQEAPARPGSVPAVTLRRFELGDVDAMLEWASDPEVTAFMAWDACTSRDALLAFLRDAVLPHPWFRAVCLGGGGHCRPV
GAVSVTPTDDACRAELRVVLARAHRGKGVATAAARRAVSAAFGDLPGVERVEALVDVDHNAAARRVLEKAGFQREAVLRS
YRVVKGRLRDVAVYSFISTDPVVE

Nucleotide Sequence
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ATGGAGCAAGAAGCGCCTGCCCGAC...

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Protein ZmHAG9

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmHAG9 is the regulator

Interactions where ZmHAG9 is the target
Expand

Zm00001eb060530_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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Expand

GRMZM2G478798_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d034419_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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